Development and validation of a pulmonary function test data extraction tool for the US department of veterans affairs electronic health record.

Rabin AS, Weinstein JB, Seelye SM, Whittington TN, Hogan CK, Prescott HC. Development and validation of a pulmonary function test data extraction tool for the US department of veterans affairs electronic health record. BMC research notes. 2024 Apr 23; 17(1):115.

Related HSR&D Project(s)

• IIR 23-032 – Veterans Affairs Study of a Real-World Inhaler Delivery Device Transition on Climate and Health Outcomes (VA-SWITCH)

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Abstract:

OBJECTIVE: Pulmonary function test (PFT) results are recorded variably across hospitals in the Department of Veterans Affairs (VA) electronic health record (EHR), using both unstructured and semi-structured notes. We developed and validated a hospital-specific code to extract pre-bronchodilator measures of obstruction (ratio of forced expiratory volume in one second [FEV] to forced vital capacity [FVC]) and severity of obstruction (percent predicted of FEV). RESULTS: Among 36 VA facilities with the most PFTs completed between 2018 and 2022 from a parent cohort of veterans receiving long-acting controller inhalers, 12 had a consistent syntactical convention or template for reporting PFT data in the EHR. Of the 42,718 PFTs identified from these 12 facilities, the hospital-specific text processing pipeline yielded 24,860 values for the FEV:FVC ratio and 23,729 values for FEV. A ratio of FEV:FVC less than 0.7 was identified in 17,615 of 24,922 studies (70.7%); 8864 of 24,922 (35.6%) had a severe or very severe reduction in FEV ( < 50% of the predicted value). Among 100 randomly selected PFT reports reviewed by two pulmonary physicians, the coding solution correctly identified the presence of obstruction in 99 out of 100 studies and the degree of obstruction in 96 out of 100 studies.